Identification of genetic relationships and subspecies signatures in Xylella fastidiosa
Identifieur interne : 000532 ( Main/Exploration ); précédent : 000531; suivant : 000533Identification of genetic relationships and subspecies signatures in Xylella fastidiosa
Auteurs : Nicolas Denancé [France] ; Martial Briand [France] ; Romain Gaborieau [France] ; Sylvain Gaillard [France] ; Marie-Agnès Jacques [France]Source :
- BMC Genomics [ 1471-2164 ] ; 2019.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : DNA, Bacterial, DNA, Ribosomal, RNA, Ribosomal, 16S.
- classification : Xylella.
- genetics : Xylella.
- methods : Genomics, Sequence Analysis, DNA.
- Data Mining, Gene Ontology, Phylogeny, Polymorphism, Single Nucleotide.
Abstract
The phytopathogenic bacterium
SkIf (Specific k-mers Identification) was designed and exploited for comparative genomics on a dataset of 46
SkIf is a robust and rapid software, freely available, that can be dedicated to the comparison of sequence datasets and is applicable to any field of research. Applied to
The online version of this article (10.1186/s12864-019-5565-9) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s12864-019-5565-9
PubMed: 30909861
PubMed Central: 6434890
Affiliations:
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Le document en format XML
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type="wicri:Area/Main/Exploration">000532</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Identification of genetic relationships and subspecies signatures in <italic>Xylella fastidiosa</italic></title><author><name sortKey="Denance, Nicolas" sort="Denance, Nicolas" uniqKey="Denance N" first="Nicolas" last="Denancé">Nicolas Denancé</name><affiliation wicri:level="3"><nlm:aff id="Aff1">IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName></affiliation></author><author><name sortKey="Briand, Martial" sort="Briand, Martial" uniqKey="Briand M" first="Martial" last="Briand">Martial Briand</name><affiliation wicri:level="3"><nlm:aff id="Aff1">IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName></affiliation></author><author><name sortKey="Gaborieau, Romain" sort="Gaborieau, Romain" uniqKey="Gaborieau R" first="Romain" last="Gaborieau">Romain Gaborieau</name><affiliation wicri:level="3"><nlm:aff id="Aff1">IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName></affiliation></author><author><name sortKey="Gaillard, Sylvain" sort="Gaillard, Sylvain" uniqKey="Gaillard S" first="Sylvain" last="Gaillard">Sylvain Gaillard</name><affiliation wicri:level="3"><nlm:aff id="Aff1">IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName></affiliation></author><author><name sortKey="Jacques, Marie Agnes" sort="Jacques, Marie Agnes" uniqKey="Jacques M" first="Marie-Agnès" last="Jacques">Marie-Agnès Jacques</name><affiliation wicri:level="3"><nlm:aff id="Aff1">IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>IRHS, INRA, AGROCAMPUS-Ouest, Université d’Angers, SFR 4207 QUASAV, 42 rue Georges Morel, 49071 Beaucouzé cedex</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName></affiliation></author></analytic><series><title level="j">BMC Genomics</title><idno type="eISSN">1471-2164</idno><imprint><date when="2019">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>DNA, Bacterial (genetics)</term><term>DNA, Ribosomal (genetics)</term><term>Data Mining</term><term>Gene Ontology</term><term>Genomics (methods)</term><term>Phylogeny</term><term>Polymorphism, Single Nucleotide</term><term>RNA, Ribosomal, 16S (genetics)</term><term>Sequence Analysis, DNA (methods)</term><term>Xylella (classification)</term><term>Xylella (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (génétique)</term><term>ADN ribosomique (génétique)</term><term>ARN ribosomique 16S (génétique)</term><term>Analyse de séquence d'ADN ()</term><term>Fouille de données</term><term>Gene Ontology</term><term>Génomique ()</term><term>Phylogénie</term><term>Polymorphisme de nucléotide simple</term><term>Xylella ()</term><term>Xylella (génétique)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Bacterial</term><term>DNA, Ribosomal</term><term>RNA, Ribosomal, 16S</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Xylella</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Xylella</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term><term>ADN ribosomique</term><term>ARN ribosomique 16S</term><term>Xylella</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Genomics</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Data Mining</term><term>Gene Ontology</term><term>Phylogeny</term><term>Polymorphism, Single Nucleotide</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Fouille de données</term><term>Gene Ontology</term><term>Génomique</term><term>Phylogénie</term><term>Polymorphisme de nucléotide simple</term><term>Xylella</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p id="Par1">The phytopathogenic bacterium <italic>Xylella fastidiosa</italic> was thought to be restricted to the Americas where it infects and kills numerous hosts. Its detection worldwide has been blooming since 2013 in Europe and Asia. Genetically diverse, this species is divided into six subspecies but genetic traits governing this classification are poorly understood.</p></sec><sec><title>Results</title><p id="Par2">SkIf (Specific k-mers Identification) was designed and exploited for comparative genomics on a dataset of 46 <italic>X. fastidiosa</italic> genomes, including seven newly sequenced individuals. It was helpful to quickly check the synonymy between strains from different collections. SkIf identified specific SNPs within 16S rRNA sequences that can be employed for predicting the distribution of <italic>Xylella</italic> through data mining. Applied to inter- and intra-subspecies analyses, it identified specific k-mers in genes affiliated to differential gene ontologies. Chemotaxis-related genes more prevalently possess specific k-mers in genomes from subspecies <italic>fastidiosa, morus</italic> and <italic>sandyi</italic> taken as a whole group. In the subspecies <italic>pauca</italic> increased abundance of specific k-mers was found in genes associated with the bacterial cell wall/envelope/plasma membrane. Most often, the k-mer specificity occurred in core genes with non-synonymous SNPs in their sequences in genomes of the other subspecies, suggesting putative impact in the protein functions. The presence of two integrative and conjugative elements (ICEs) was identified, one chromosomic and an entire plasmid in a single strain of <italic>X. fastidiosa</italic> subsp. <italic>pauca</italic>. Finally, a revised taxonomy of <italic>X. fastidiosa</italic> into three major clades defined by the subspecies <italic>pauca</italic> (clade I), <italic>multiplex</italic> (clade II) and the combination of <italic>fastidiosa, morus</italic> and <italic>sandyi</italic> (clade III) was strongly supported by k-mers specifically associated with these subspecies.</p></sec><sec><title>Conclusions</title><p id="Par3">SkIf is a robust and rapid software, freely available, that can be dedicated to the comparison of sequence datasets and is applicable to any field of research. Applied to <italic>X. fastidiosa</italic>, an emerging pathogen in Europe<italic>,</italic> it provided an important resource to mine for identifying genetic markers of subspecies to optimize the strategies attempted to limit the pathogen dissemination in novel areas.</p></sec><sec><title>Electronic supplementary material</title><p>The online version of this article (10.1186/s12864-019-5565-9) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Saponari, M" uniqKey="Saponari M">M Saponari</name></author><author><name sortKey="Boscia, D" uniqKey="Boscia D">D Boscia</name></author><author><name sortKey="Nigro, F" uniqKey="Nigro F">F Nigro</name></author><author><name sortKey="Martelli, Gp" uniqKey="Martelli G">GP Martelli</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Denance, N" uniqKey="Denance N">N Denancé</name></author><author><name sortKey="Legendre, B" uniqKey="Legendre B">B Legendre</name></author><author><name sortKey="Briand, M" uniqKey="Briand M">M Briand</name></author><author><name sortKey="Olivier, V" uniqKey="Olivier V">V Olivier</name></author><author><name sortKey="De Boisseson, C" uniqKey="De Boisseson C">C de Boisséson</name></author><author><name sortKey="Poliakoff, F" uniqKey="Poliakoff F">F Poliakoff</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Strona, G" uniqKey="Strona G">G Strona</name></author><author><name sortKey="Carstens, Cj" uniqKey="Carstens C">CJ Carstens</name></author><author><name sortKey="Beck, Psa" uniqKey="Beck P">PSA Beck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Soubeyrand, S" uniqKey="Soubeyrand S">S Soubeyrand</name></author><author><name sortKey="De Jerphanion, P" uniqKey="De Jerphanion P">P de Jerphanion</name></author><author><name sortKey="Martin, O" uniqKey="Martin O">O Martin</name></author><author><name sortKey="Saussac, M" uniqKey="Saussac M">M Saussac</name></author><author><name sortKey="Manceau, C" uniqKey="Manceau C">C Manceau</name></author><author><name sortKey="Hendrikx, P" uniqKey="Hendrikx P">P Hendrikx</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Bergsma Vlami, M" uniqKey="Bergsma Vlami M">M Bergsma-Vlami</name></author><author><name sortKey="Van De Bilt, Jlj" uniqKey="Van De Bilt J">JLJ van de Bilt</name></author><author><name sortKey="Tjou Tam Sin, Nna" uniqKey="Tjou Tam Sin N">NNA Tjou-Tam-Sin</name></author><author><name sortKey="Helderman, Cm" uniqKey="Helderman C">CM Helderman</name></author><author><name sortKey="Gorkink Smits, Ppma" uniqKey="Gorkink Smits P">PPMA Gorkink-Smits</name></author><author><name sortKey="Landman, Nm" uniqKey="Landman N">NM Landman</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Jacques, Ma" uniqKey="Jacques M">MA Jacques</name></author><author><name sortKey="Denance, N" uniqKey="Denance N">N Denancé</name></author><author><name sortKey="Legendre, B" uniqKey="Legendre B">B Legendre</name></author><author><name sortKey="Morel, E" uniqKey="Morel E">E Morel</name></author><author><name sortKey="Briand, M" uniqKey="Briand M">M Briand</name></author><author><name sortKey="Mississipi, S" uniqKey="Mississipi S">S Mississipi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bergsma Vlami, M" uniqKey="Bergsma Vlami M">M Bergsma-Vlami</name></author><author><name sortKey="Van De Bilt, Jlj" uniqKey="Van De Bilt J">JLJ van de Bilt</name></author><author><name sortKey="Tjou Tam Sin, Nna" uniqKey="Tjou Tam Sin N">NNA Tjou-Tam-Sin</name></author><author><name sortKey="Van De Vossenberg, Btlh" uniqKey="Van De Vossenberg B">BTLH van de Vossenberg</name></author><author><name sortKey="Westenberg, M" uniqKey="Westenberg M">M Westenberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Su, Cc" uniqKey="Su C">CC Su</name></author><author><name sortKey="Deng, Wl" uniqKey="Deng W">WL Deng</name></author><author><name sortKey="Jan, Fj" uniqKey="Jan F">FJ Jan</name></author><author><name sortKey="Chang, Cj" uniqKey="Chang C">CJ Chang</name></author><author><name sortKey="Huang, H" uniqKey="Huang H">H Huang</name></author><author><name sortKey="Shih, Ht" uniqKey="Shih H">HT Shih</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nunney, L" uniqKey="Nunney L">L Nunney</name></author><author><name sortKey="Yuan, X" uniqKey="Yuan X">X Yuan</name></author><author><name sortKey="Bromley, Re" uniqKey="Bromley R">RE Bromley</name></author><author><name sortKey="Stouthamer, R" uniqKey="Stouthamer R">R Stouthamer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nunney, L" uniqKey="Nunney L">L Nunney</name></author><author><name sortKey="Ortiz, B" uniqKey="Ortiz B">B Ortiz</name></author><author><name sortKey="Russell, Sa" uniqKey="Russell S">SA Russell</name></author><author><name sortKey="Ruiz Sanchez, R" uniqKey="Ruiz Sanchez R">R Ruiz-Sanchez</name></author><author><name sortKey="Stouthamer, R" uniqKey="Stouthamer R">R Stouthamer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nunney, L" uniqKey="Nunney L">L Nunney</name></author><author><name sortKey="Schuenzel, El" uniqKey="Schuenzel E">EL Schuenzel</name></author><author><name sortKey="Scally, M" uniqKey="Scally M">M Scally</name></author><author><name sortKey="Bromley, Re" uniqKey="Bromley R">RE Bromley</name></author><author><name sortKey="Stouthamer, R" uniqKey="Stouthamer R">R Stouthamer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Loconsole, G" uniqKey="Loconsole G">G Loconsole</name></author><author><name sortKey="Saponari, M" uniqKey="Saponari M">M Saponari</name></author><author><name sortKey="Boscia, D" uniqKey="Boscia D">D Boscia</name></author><author><name sortKey="D Ttoma, G" uniqKey="D Ttoma G">G D’Attoma</name></author><author><name sortKey="Morelli, M" uniqKey="Morelli M">M Morelli</name></author><author><name sortKey="Martelli, Gp" uniqKey="Martelli G">GP Martelli</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Coletta Filho, Hd" uniqKey="Coletta Filho H">HD Coletta-Filho</name></author><author><name sortKey="Francisco, Cs" uniqKey="Francisco C">CS Francisco</name></author><author><name sortKey="Lopes, Jrs" uniqKey="Lopes J">JRS Lopes</name></author><author><name sortKey="Muller, C" uniqKey="Muller C">C Muller</name></author><author><name sortKey="Almeida, Rpp" uniqKey="Almeida R">RPP Almeida</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rizk, G" uniqKey="Rizk G">G Rizk</name></author><author><name sortKey="Lavenier, D" uniqKey="Lavenier D">D Lavenier</name></author><author><name sortKey="Chikhi, R" uniqKey="Chikhi R">R Chikhi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ghandi, M" uniqKey="Ghandi M">M Ghandi</name></author><author><name sortKey="Lee, D" uniqKey="Lee D">D Lee</name></author><author><name sortKey="Mohammad Noori, M" uniqKey="Mohammad Noori M">M Mohammad-Noori</name></author><author><name sortKey="Beer, Ma" uniqKey="Beer M">MA Beer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Melsted, P" uniqKey="Melsted P">P Melsted</name></author><author><name sortKey="Halld Rsson, Bv" uniqKey="Halld Rsson B">BV Halldórsson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Abo, Rp" uniqKey="Abo R">RP Abo</name></author><author><name sortKey="Ducar, M" uniqKey="Ducar M">M Ducar</name></author><author><name sortKey="Garcia, Ep" uniqKey="Garcia E">EP Garcia</name></author><author><name sortKey="Thorner, Ar" uniqKey="Thorner A">AR Thorner</name></author><author><name sortKey="Rojas Rudilla, V" uniqKey="Rojas Rudilla V">V Rojas-Rudilla</name></author><author><name sortKey="Lin, L" uniqKey="Lin L">L Lin</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Mapleson, D" uniqKey="Mapleson D">D Mapleson</name></author><author><name sortKey="Garcia Accinelli, G" uniqKey="Garcia Accinelli G">G Garcia Accinelli</name></author><author><name sortKey="Kettleborough, G" uniqKey="Kettleborough G">G Kettleborough</name></author><author><name sortKey="Wright, J" uniqKey="Wright J">J Wright</name></author><author><name sortKey="Clavijo, Bj" uniqKey="Clavijo B">BJ Clavijo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marinier, E" uniqKey="Marinier E">E Marinier</name></author><author><name sortKey="Zaheer, R" uniqKey="Zaheer R">R Zaheer</name></author><author><name sortKey="Berry, C" uniqKey="Berry C">C Berry</name></author><author><name sortKey="Weedmark, Ka" uniqKey="Weedmark K">KA Weedmark</name></author><author><name sortKey="Domaratzki, M" uniqKey="Domaratzki M">M Domaratzki</name></author><author><name sortKey="Mabon, P" uniqKey="Mabon P">P Mabon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pandey, P" uniqKey="Pandey P">P Pandey</name></author><author><name sortKey="Bender, Ma" uniqKey="Bender M">MA Bender</name></author><author><name sortKey="Johnson, R" uniqKey="Johnson R">R Johnson</name></author><author><name sortKey="Patro, R" uniqKey="Patro R">R Patro</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hasman, H" uniqKey="Hasman H">H Hasman</name></author><author><name sortKey="Saputra, D" uniqKey="Saputra D">D Saputra</name></author><author><name sortKey="Sicheritz Ponten, T" uniqKey="Sicheritz Ponten T">T Sicheritz-Ponten</name></author><author><name sortKey="Lund, O" uniqKey="Lund O">O Lund</name></author><author><name sortKey="Svendsen, Ca" uniqKey="Svendsen C">CA Svendsen</name></author><author><name sortKey="Frimodt M Ller, N" uniqKey="Frimodt M Ller N">N Frimodt-Møller</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chattaway, Ma" uniqKey="Chattaway M">MA Chattaway</name></author><author><name sortKey="Schaefer, U" uniqKey="Schaefer U">U Schaefer</name></author><author><name sortKey="Tewolde, R" uniqKey="Tewolde R">R Tewolde</name></author><author><name sortKey="Dallman, Tj" uniqKey="Dallman T">TJ Dallman</name></author><author><name sortKey="Jenkins, C" uniqKey="Jenkins C">C Jenkins</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Richter, M" uniqKey="Richter M">M Richter</name></author><author><name sortKey="Rossell M Ra, R" uniqKey="Rossell M Ra R">R Rosselló-Móra</name></author><author><name sortKey="Glockner, Fo" uniqKey="Glockner F">FO Glöckner</name></author><author><name sortKey="Peplies, J" uniqKey="Peplies J">J Peplies</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pritchard, L" uniqKey="Pritchard L">L Pritchard</name></author><author><name sortKey="Glover, Rh" uniqKey="Glover R">RH Glover</name></author><author><name sortKey="Humphris, S" uniqKey="Humphris S">S Humphris</name></author><author><name sortKey="Elphinstone, Jg" uniqKey="Elphinstone J">JG Elphinstone</name></author><author><name sortKey="Toth, Ik" uniqKey="Toth I">IK Toth</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schaad, Nw" uniqKey="Schaad N">NW Schaad</name></author><author><name sortKey="Postnikova, E" uniqKey="Postnikova E">E Postnikova</name></author><author><name sortKey="Lacy, G" uniqKey="Lacy G">G Lacy</name></author><author><name sortKey="Fatmi, M" uniqKey="Fatmi M">M Fatmi</name></author><author><name sortKey="Chang, Cj" uniqKey="Chang C">CJ Chang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Verslyppe, B" uniqKey="Verslyppe B">B Verslyppe</name></author><author><name sortKey="De Smet, W" uniqKey="De Smet W">W De Smet</name></author><author><name sortKey="De Baets, B" uniqKey="De Baets B">B De Baets</name></author><author><name sortKey="De Vos, P" uniqKey="De Vos P">P De Vos</name></author><author><name sortKey="Dawyndt, D" uniqKey="Dawyndt D">D Dawyndt</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Giampetruzzi, A" uniqKey="Giampetruzzi A">A Giampetruzzi</name></author><author><name sortKey="Chiumenti, M" uniqKey="Chiumenti M">M Chiumenti</name></author><author><name sortKey="Saponari, M" uniqKey="Saponari M">M Saponari</name></author><author><name sortKey="Donvito, G" uniqKey="Donvito G">G Donvito</name></author><author><name sortKey="Italiano, A" uniqKey="Italiano A">A Italiano</name></author><author><name sortKey="Loconsole, G" uniqKey="Loconsole G">G Loconsole</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rogers, Ee" uniqKey="Rogers E">EE Rogers</name></author><author><name sortKey="Stenger, Dc" uniqKey="Stenger D">DC Stenger</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Giampetruzzi, A" uniqKey="Giampetruzzi A">A Giampetruzzi</name></author><author><name sortKey="Saponari, M" uniqKey="Saponari M">M Saponari</name></author><author><name sortKey="Almeida, Rpp" uniqKey="Almeida R">RPP Almeida</name></author><author><name sortKey="Essakhi, S" uniqKey="Essakhi S">S Essakhi</name></author><author><name sortKey="Boscia, D" uniqKey="Boscia D">D Boscia</name></author><author><name sortKey="Loconsole, G" uniqKey="Loconsole G">G Loconsole</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Al Okaily, A" uniqKey="Al Okaily A">A Al-Okaily</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Powers, Jg" uniqKey="Powers J">JG Powers</name></author><author><name sortKey="Weigman, Vj" uniqKey="Weigman V">VJ Weigman</name></author><author><name sortKey="Shu, J" uniqKey="Shu J">J Shu</name></author><author><name sortKey="Pufky, Jm" uniqKey="Pufky J">JM Pufky</name></author><author><name sortKey="Cox, D" uniqKey="Cox D">D Cox</name></author><author><name sortKey="Hurban, P" uniqKey="Hurban P">P Hurban</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Konstantinidis, Kt" uniqKey="Konstantinidis K">KT Konstantinidis</name></author><author><name sortKey="Tiedje, Jm" uniqKey="Tiedje J">JM Tiedje</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Richter, M" uniqKey="Richter M">M Richter</name></author><author><name sortKey="Rossello Mora, R" uniqKey="Rossello Mora R">R Rossello-Mora</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Delcher, Al" uniqKey="Delcher A">AL Delcher</name></author><author><name sortKey="Kasif, S" uniqKey="Kasif S">S Kasif</name></author><author><name sortKey="Fleischmann, Rd" uniqKey="Fleischmann R">RD Fleischmann</name></author><author><name sortKey="Peterson, J" uniqKey="Peterson J">J Peterson</name></author><author><name sortKey="White, O" uniqKey="White O">O White</name></author><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Teeling, H" uniqKey="Teeling H">H Teeling</name></author><author><name sortKey="Waldmann, J" uniqKey="Waldmann J">J Waldmann</name></author><author><name sortKey="Lombardot, T" uniqKey="Lombardot T">T Lombardot</name></author><author><name sortKey="Bauer, M" uniqKey="Bauer M">M Bauer</name></author><author><name sortKey="Glockner, Fo" uniqKey="Glockner F">FO Glöckner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Goris, J" uniqKey="Goris J">J Goris</name></author><author><name sortKey="Konstantinidis, Kt" uniqKey="Konstantinidis K">KT Konstantinidis</name></author><author><name sortKey="Klappenbach, Ja" uniqKey="Klappenbach J">JA Klappenbach</name></author><author><name sortKey="Coenye, T" uniqKey="Coenye T">T Coenye</name></author><author><name sortKey="Vandamme, P" uniqKey="Vandamme P">P Vandamme</name></author><author><name sortKey="Tiedje, Jm" uniqKey="Tiedje J">JM Tiedje</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marcelletti, S" uniqKey="Marcelletti S">S Marcelletti</name></author><author><name sortKey="Scortichini, M" uniqKey="Scortichini M">M Scortichini</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Goris, J" uniqKey="Goris J">J Goris</name></author><author><name sortKey="Dejonghe, W" uniqKey="Dejonghe W">W Dejonghe</name></author><author><name sortKey="Falsen, E" uniqKey="Falsen E">E Falsen</name></author><author><name sortKey="De Clerck, E" uniqKey="De Clerck E">E De Clerck</name></author><author><name sortKey="Geeraerts, B" uniqKey="Geeraerts B">B Geeraerts</name></author><author><name sortKey="Willems, A" uniqKey="Willems A">A Willems</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lee, Y" uniqKey="Lee Y">Y Lee</name></author><author><name sortKey="Jeon, Co" uniqKey="Jeon C">CO Jeon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nelson, Mjk" uniqKey="Nelson M">MJK Nelson</name></author><author><name sortKey="Montgomery, So" uniqKey="Montgomery S">SO Montgomery</name></author><author><name sortKey="O Eill, Ej" uniqKey="O Eill E">EJ O’Neill</name></author><author><name sortKey="Pritchard, Ph" uniqKey="Pritchard P">PH Pritchard</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jones, Jb" uniqKey="Jones J">JB Jones</name></author><author><name sortKey="Lacy, Gh" uniqKey="Lacy G">GH Lacy</name></author><author><name sortKey="Bouzar, H" uniqKey="Bouzar H">H Bouzar</name></author><author><name sortKey="Stall, Re" uniqKey="Stall R">RE Stall</name></author><author><name sortKey="Schaad, Nw" uniqKey="Schaad N">NW Schaad</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Albuquerque, P" uniqKey="Albuquerque P">P Albuquerque</name></author><author><name sortKey="Caridade, Cmr" uniqKey="Caridade C">CMR Caridade</name></author><author><name sortKey="Rodrigues, As" uniqKey="Rodrigues A">AS Rodrigues</name></author><author><name sortKey="Marcal, Ars" uniqKey="Marcal A">ARS Marcal</name></author><author><name sortKey="Cruz, J" uniqKey="Cruz J">J Cruz</name></author><author><name sortKey="Cruz, L" uniqKey="Cruz L">L Cruz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Estrada De Los Santos, P" uniqKey="Estrada De Los Santos P">P Estrada-De Los Santos</name></author><author><name sortKey="Bustillos Cristales, R" uniqKey="Bustillos Cristales R">R Bustillos-Cristales</name></author><author><name sortKey="Caballero Mellado, J" uniqKey="Caballero Mellado J">J Caballero-Mellado</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Carvalho, Gm" uniqKey="Carvalho G">GM Carvalho</name></author><author><name sortKey="Carvalho, Ap" uniqKey="Carvalho A">AP Carvalho</name></author><author><name sortKey="Folescu, Tw" uniqKey="Folescu T">TW Folescu</name></author><author><name sortKey="Higa, L" uniqKey="Higa L">L Higa</name></author><author><name sortKey="Teixeira, Lm" uniqKey="Teixeira L">LM Teixeira</name></author><author><name sortKey="Plotkowski, Mc" uniqKey="Plotkowski M">MC Plotkowski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nunney, L" uniqKey="Nunney L">L Nunney</name></author><author><name sortKey="Elfekih, S" uniqKey="Elfekih S">S Elfekih</name></author><author><name sortKey="Stouthamer, R" uniqKey="Stouthamer R">R Stouthamer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yuan, X" uniqKey="Yuan X">X Yuan</name></author><author><name sortKey="Morano, L" uniqKey="Morano L">L Morano</name></author><author><name sortKey="Bromley, R" uniqKey="Bromley R">R Bromley</name></author><author><name sortKey="Spring Pearson, S" uniqKey="Spring Pearson S">S Spring-Pearson</name></author><author><name sortKey="Stouthamer, R" uniqKey="Stouthamer R">R Stouthamer</name></author><author><name sortKey="Nunney, L" uniqKey="Nunney L">L Nunney</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wells, Jm" uniqKey="Wells J">JM Wells</name></author><author><name sortKey="Raju, Bc" uniqKey="Raju B">BC Raju</name></author><author><name sortKey="Nyland, G" uniqKey="Nyland G">G Nyland</name></author><author><name sortKey="Lowe, Sk" uniqKey="Lowe S">SK Lowe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zerbino, Dr" uniqKey="Zerbino D">DR Zerbino</name></author><author><name sortKey="Birney, E" uniqKey="Birney E">E Birney</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Sallet, E" uniqKey="Sallet E">E Sallet</name></author><author><name sortKey="Gouzy, J" uniqKey="Gouzy J">J Gouzy</name></author><author><name sortKey="Schiex, T" uniqKey="Schiex T">T Schiex</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Simpson, Aj" uniqKey="Simpson A">AJ Simpson</name></author><author><name sortKey="Reinach, Fc" uniqKey="Reinach F">FC Reinach</name></author><author><name sortKey="Arruda, P" uniqKey="Arruda P">P Arruda</name></author><author><name sortKey="Abreu, Fa" uniqKey="Abreu F">FA Abreu</name></author><author><name sortKey="Acencio, M" uniqKey="Acencio M">M Acencio</name></author><author><name sortKey="Alvarenga, R" uniqKey="Alvarenga R">R Alvarenga</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Sluys, Ma" uniqKey="Van Sluys M">MA Van Sluys</name></author><author><name sortKey="De Oliveira, Mc" uniqKey="De Oliveira M">MC de Oliveira</name></author><author><name sortKey="Monteiro Vitorello, Cb" uniqKey="Monteiro Vitorello C">CB Monteiro-Vitorello</name></author><author><name sortKey="Miyaki, Cy" uniqKey="Miyaki C">CY Miyaki</name></author><author><name sortKey="Furlan, Lr" uniqKey="Furlan L">LR Furlan</name></author><author><name sortKey="Camargo, Le" uniqKey="Camargo L">LE Camargo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gueguen, L" uniqKey="Gueguen L">L Guéguen</name></author><author><name sortKey="Gaillard, S" uniqKey="Gaillard S">S Gaillard</name></author><author><name sortKey="Boussau, B" uniqKey="Boussau B">B Boussau</name></author><author><name sortKey="Gouy, M" uniqKey="Gouy M">M Gouy</name></author><author><name sortKey="Groussin, M" uniqKey="Groussin M">M Groussin</name></author><author><name sortKey="Rochette, Nc" uniqKey="Rochette N">NC Rochette</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kearse, M" uniqKey="Kearse M">M Kearse</name></author><author><name sortKey="Moir, R" uniqKey="Moir R">R Moir</name></author><author><name sortKey="Wilson, A" uniqKey="Wilson A">A Wilson</name></author><author><name sortKey="Stones Havas, S" uniqKey="Stones Havas S">S Stones-Havas</name></author><author><name sortKey="Cheung, M" uniqKey="Cheung M">M Cheung</name></author><author><name sortKey="Sturrock, S" uniqKey="Sturrock S">S Sturrock</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ward, Jh" uniqKey="Ward J">JH Ward</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paradis, E" uniqKey="Paradis E">E Paradis</name></author><author><name sortKey="Claude, J" uniqKey="Claude J">J Claude</name></author><author><name sortKey="Strimmer, K" uniqKey="Strimmer K">K Strimmer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, Z" uniqKey="Zhang Z">Z Zhang</name></author><author><name sortKey="Schwartz, S" uniqKey="Schwartz S">S Schwartz</name></author><author><name sortKey="Wagner, L" uniqKey="Wagner L">L Wagner</name></author><author><name sortKey="Miller, W" uniqKey="Miller W">W Miller</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gotz, S" uniqKey="Gotz S">S Götz</name></author><author><name sortKey="Garcia G Mez, Jm" uniqKey="Garcia G Mez J">JM García-Gómez</name></author><author><name sortKey="Terol, J" uniqKey="Terol J">J Terol</name></author><author><name sortKey="Williams, Td" uniqKey="Williams T">TD Williams</name></author><author><name sortKey="Nagaraj, Sh" uniqKey="Nagaraj S">SH Nagaraj</name></author><author><name sortKey="Nueda, Mj" uniqKey="Nueda M">MJ Nueda</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bardou, P" uniqKey="Bardou P">P Bardou</name></author><author><name sortKey="Mariette, J" uniqKey="Mariette J">J Mariette</name></author><author><name sortKey="Escudie, F" uniqKey="Escudie F">F Escudié</name></author><author><name sortKey="Djemiel, C" uniqKey="Djemiel C">C Djemiel</name></author><author><name sortKey="Klopp, C" uniqKey="Klopp C">C Klopp</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Quast, C" uniqKey="Quast C">C Quast</name></author><author><name sortKey="Pruesse, E" uniqKey="Pruesse E">E Pruesse</name></author><author><name sortKey="Yilmaz, P" uniqKey="Yilmaz P">P Yilmaz</name></author><author><name sortKey="Gerken, J" uniqKey="Gerken J">J Gerken</name></author><author><name sortKey="Schweer, T" uniqKey="Schweer T">T Schweer</name></author><author><name sortKey="Yarza, P" uniqKey="Yarza P">P Yarza</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, S" uniqKey="Zhang S">S Zhang</name></author><author><name sortKey="Flores Cruz, Z" uniqKey="Flores Cruz Z">Z Flores-Cruz</name></author><author><name sortKey="Kumar, D" uniqKey="Kumar D">D Kumar</name></author><author><name sortKey="Chakrabarty, P" uniqKey="Chakrabarty P">P Chakrabarty</name></author><author><name sortKey="Hopkins, Dl" uniqKey="Hopkins D">DL Hopkins</name></author><author><name sortKey="Gabriel, Dw" uniqKey="Gabriel D">DW Gabriel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schreiber, Hl" uniqKey="Schreiber H">HL Schreiber</name></author><author><name sortKey="Koirala, M" uniqKey="Koirala M">M Koirala</name></author><author><name sortKey="Lara, A" uniqKey="Lara A">A Lara</name></author><author><name sortKey="Ojeda, M" uniqKey="Ojeda M">M Ojeda</name></author><author><name sortKey="Dowd, Se" uniqKey="Dowd S">SE Dowd</name></author><author><name sortKey="Bextine, B" uniqKey="Bextine B">B Bextine</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author><author><name sortKey="Xie, G" uniqKey="Xie G">G Xie</name></author><author><name sortKey="Han, S" uniqKey="Han S">S Han</name></author><author><name sortKey="Chertkov, O" uniqKey="Chertkov O">O Chertkov</name></author><author><name sortKey="Sims, D" uniqKey="Sims D">D Sims</name></author><author><name sortKey="Civerolo, El" uniqKey="Civerolo E">EL Civerolo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author><author><name sortKey="Wu, F" uniqKey="Wu F">F Wu</name></author><author><name sortKey="Zheng, Z" uniqKey="Zheng Z">Z Zheng</name></author><author><name sortKey="Deng, X" uniqKey="Deng X">X Deng</name></author><author><name sortKey="Burbank, Lp" uniqKey="Burbank L">LP Burbank</name></author><author><name sortKey="Stenger, Dc" uniqKey="Stenger D">DC Stenger</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Horn, C" uniqKey="Van Horn C">C Van Horn</name></author><author><name sortKey="Chang, Cj" uniqKey="Chang C">CJ Chang</name></author><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bhattacharyya, A" uniqKey="Bhattacharyya A">A Bhattacharyya</name></author><author><name sortKey="Stilwagen, S" uniqKey="Stilwagen S">S Stilwagen</name></author><author><name sortKey="Ivanova, N" uniqKey="Ivanova N">N Ivanova</name></author><author><name sortKey="D Souza, M" uniqKey="D Souza M">M D'Souza</name></author><author><name sortKey="Bernal, A" uniqKey="Bernal A">A Bernal</name></author><author><name sortKey="Lykidis, A" uniqKey="Lykidis A">A Lykidis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author><author><name sortKey="Huang, H" uniqKey="Huang H">H Huang</name></author><author><name sortKey="Chang, C J" uniqKey="Chang C">C-J Chang</name></author><author><name sortKey="Stenger, Dc" uniqKey="Stenger D">DC Stenger</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Guan, W" uniqKey="Guan W">W Guan</name></author><author><name sortKey="Shao, J" uniqKey="Shao J">J Shao</name></author><author><name sortKey="Davis, Re" uniqKey="Davis R">RE Davis</name></author><author><name sortKey="Zhao, T" uniqKey="Zhao T">T Zhao</name></author><author><name sortKey="Huang, Q" uniqKey="Huang Q">Q Huang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schuenzel, El" uniqKey="Schuenzel E">EL Schuenzel</name></author><author><name sortKey="Scally, M" uniqKey="Scally M">M Scally</name></author><author><name sortKey="Stouthamer, R" uniqKey="Stouthamer R">R Stouthamer</name></author><author><name sortKey="Nunney, L" uniqKey="Nunney L">L Nunney</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Giampetruzzi, A" uniqKey="Giampetruzzi A">A Giampetruzzi</name></author><author><name sortKey="Loconsole, G" uniqKey="Loconsole G">G Loconsole</name></author><author><name sortKey="Boscia, D" uniqKey="Boscia D">D Boscia</name></author><author><name sortKey="Calzolari, A" uniqKey="Calzolari A">A Calzolari</name></author><author><name sortKey="Chiumenti, M" uniqKey="Chiumenti M">M Chiumenti</name></author><author><name sortKey="Martelli, Gp" uniqKey="Martelli G">GP Martelli</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Guan, W" uniqKey="Guan W">W Guan</name></author><author><name sortKey="Shao, J" uniqKey="Shao J">J Shao</name></author><author><name sortKey="Zhao, T" uniqKey="Zhao T">T Zhao</name></author><author><name sortKey="Huang, Q" uniqKey="Huang Q">Q Huang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alencar, Vc" uniqKey="Alencar V">VC Alencar</name></author><author><name sortKey="Barbosa, D" uniqKey="Barbosa D">D Barbosa</name></author><author><name sortKey="Santos, Ds" uniqKey="Santos D">DS Santos</name></author><author><name sortKey="Oliveira, Acf" uniqKey="Oliveira A">ACF Oliveira</name></author><author><name sortKey="De Oliveira, Rc" uniqKey="De Oliveira R">RC de Oliveira</name></author><author><name sortKey="Nunes, Lr" uniqKey="Nunes L">LR Nunes</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Niza, B" uniqKey="Niza B">B Niza</name></author><author><name sortKey="Merfa, Mv" uniqKey="Merfa M">MV Merfa</name></author><author><name sortKey="Alencar, Vc" uniqKey="Alencar V">VC Alencar</name></author><author><name sortKey="Menegidio, Fb" uniqKey="Menegidio F">FB Menegidio</name></author><author><name sortKey="Nunes, Lr" uniqKey="Nunes L">LR Nunes</name></author><author><name sortKey="Machado, Ma" uniqKey="Machado M">MA Machado</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Su, Cc" uniqKey="Su C">CC Su</name></author><author><name sortKey="Deng, Wl" uniqKey="Deng W">WL Deng</name></author><author><name sortKey="Jan, Fj" uniqKey="Jan F">FJ Jan</name></author><author><name sortKey="Chang, Cj" uniqKey="Chang C">CJ Chang</name></author><author><name sortKey="Huang, H" uniqKey="Huang H">H Huang</name></author><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>France</li></country><region><li>Pays de la Loire</li></region><settlement><li>Beaucouzé</li></settlement></list><tree><country name="France"><region name="Pays de la Loire"><name sortKey="Denance, Nicolas" sort="Denance, Nicolas" uniqKey="Denance N" first="Nicolas" last="Denancé">Nicolas Denancé</name></region><name sortKey="Briand, Martial" sort="Briand, Martial" uniqKey="Briand M" first="Martial" last="Briand">Martial Briand</name><name sortKey="Gaborieau, Romain" sort="Gaborieau, Romain" uniqKey="Gaborieau R" first="Romain" last="Gaborieau">Romain Gaborieau</name><name sortKey="Gaillard, Sylvain" sort="Gaillard, Sylvain" uniqKey="Gaillard S" first="Sylvain" last="Gaillard">Sylvain Gaillard</name><name sortKey="Jacques, Marie Agnes" sort="Jacques, Marie Agnes" uniqKey="Jacques M" first="Marie-Agnès" last="Jacques">Marie-Agnès 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